| Protein ZmHSF20 | |
|---|---|
|
ZmHSF20 is a protein in the HSF family.
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| Information | |
| TF Name: | ZmHSF20 |
| Species: | Maize |
| TF Family: | HSF |
| Gene Name(Synonym): | HSFTF20 |
| Uniprot ID: | K7U5Y9 |
| Subgenome: | 2 |
Protein ZmHSF20
ZmHSF20 is a protein in the HSF family.
| Overview of domains present in v5 transcripts | |
|---|---|
| PF00447 | |
| Zm00001eb428800_T001 |  |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d026094 | DAPseq |  |
sequence | fimo | position |
| Zm00001d026094 | DAPseq |  |
sequence | fimo | position |
| Zm00001d026094 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d026094 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmHSF20 is the regulator
Interactions where ZmHSF20 is the target
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Zm00001eb428800_T001 from maize genome v5
Amino Acid Sequence
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MALPAAGTPPFLTKTYAMVEDSATDDTISWNDTGTAFVVWRPAEFARDLLPKHFKHSNFSSFVRQLNTYGFKKVVGDRWE
FANDGFRRGEKHLLAGIQRRKGTGAVAAVPVPGIPAGIPLPLSSPPTSSGGEPAVSSSPPRGSTAGVSGAVAELEEENAR
LRRENARLARELARARRLCDGVRQLMARYDDDQGRGGDEDPADGDEGHGGSGEGPSGPEVKPMLFGVPIGAKRLRGARGD
GDDVDDGEDNDEEQDEDDERQTVRKQGVKAARRNEASDLDVLTLSVRAAAAARTGGGSRDRKSPINAHPDRSLSLGLK
MALPAAGTPPFLTKTYAMVEDSATDDTISWNDTGTAFVVWRPAEFARDLLPKHFKHSNFSSFVRQLNTYGFKKVVGDRWE
FANDGFRRGEKHLLAGIQRRKGTGAVAAVPVPGIPAGIPLPLSSPPTSSGGEPAVSSSPPRGSTAGVSGAVAELEEENAR
LRRENARLARELARARRLCDGVRQLMARYDDDQGRGGDEDPADGDEGHGGSGEGPSGPEVKPMLFGVPIGAKRLRGARGD
GDDVDDGEDNDEEQDEDDERQTVRKQGVKAARRNEASDLDVLTLSVRAAAAARTGGGSRDRKSPINAHPDRSLSLGLK
MALPAAGTPPFLTKTYAMVEDSATDDTISWNDTGTAFVVWRPAEFARDLLPKHFKHSNFSSFVRQLNTYGFKKVVGDRWE
FANDGFRRGEKHLLAGIQRRKGTGAVAAVPVPGIPAGIPLPLSSPPTSSGGEPAVSSSPPRGSTAGVSGAVAELEEENAR
LRRENARLARELARARRLCDGVRQLMARYDDDQGRGGDEDPADGDEGHGGSGEGPSGPEVKPMLFGVPIGAKRLRGARGD
GDDVDDGEDNDEEQDEDDERQTVRKQGVKAARRNEASDLDVLTLSVRAAAAARTGGGSRDRKSPINAHPDRSLSLGLK
MALPAAGTPPFLTKTYAMVEDSATDDTISWNDTGTAFVVWRPAEFARDLLPKHFKHSNFSSFVRQLNTYGFKKVVGDRWE
FANDGFRRGEKHLLAGIQRRKGTGAVAAVPVPGIPAGIPLPLSSPPTSSGGEPAVSSSPPRGSTAGVSGAVAELEEENAR
LRRENARLARELARARRLCDGVRQLMARYDDDQGRGGDEDPADGDEGHGGSGEGPSGPEVKPMLFGVPIGAKRLRGARGD
GDDVDDGEDNDEEQDEDDERQTVRKQGVKAARRNEASDLDVLTLSVRAAAAARTGGGSRDRKSPINAHPDRSLSLGLK
MALPAAGTPPFLTKTYAMVEDSATDDTISWNDTGTAFVVWRPAEFARDLLPKHFKHSNFSSFVRQLNTYGFKKVVGDRWE
FANDGFRRGEKHLLAGIQRRKGTGAVAAVPVPGIPAGIPLPLSSPPTSSGGEPAVSSSPPRGSTAGVSGAVAELEEENAR
LRRENARLARELARARRLCDGVRQLMARYDDDQGRGGDEDPADGDEGHGGSGEGPSGPEVKPMLFGVPIGAKRLRGARGD
GDDVDDGEDNDEEQDEDDERQTVRKQGVKAARRNEASDLDVLTLSVRAAAAARTGGGSRDRKSPINAHPDRSLSLGLK
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00447 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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CGCACGTGTCGGCTACCGCAAGGAA...
CGCACGTGTCGGCTACCGCAAGGAAAGTCGGGAACCTTCTAGAACCCGCTGGATGCTTCTCTCACCTAGGTCCAACTTAATCTCATCCCCAAATCCACCTTTCTAGATGCGTCTTCCTCGCTCTGTCCTCTCCTCACACTTTCCTTTCCGCGGCCCCTCTGCTCACCGCACTCCGTTGCCTGATGGCGTTGCCGGCGGCGGGGACGCCGCCCTTCCTGACGAAAACTTACGCCATGGTGGAGGACTCGGCCACGGACGATACGATCTCGTGGAACGACACCGGCACGGCCTTCGTGGTGTGGCGCCCCGCCGAGTTCGCCCGTGACCTTCTTCCCAAGCACTTCAAGCACAGCAACTTCTCCTCGTTCGTCCGCCAGCTCAACACCTACGGATTCAAGAAGGTAGTCGGGGACAGATGGGAGTTTGCCAACGACGGCTTCCGGAGAGGCGAGAAGCACCTTCTCGCCGGAATACAGAGGCGGAAGGGGACCGGCGCCGTGGCGGCGGTACCGGTGCCGGGCATACCGGCGGGGATACCGTTACCGCTCTCGTCCCCGCCCACGAGCTCTGGCGGGGAGCCGGCGGTCTCCTCGTCGCCGCCGCGTGGCTCGACGGCTGGAGTTAGCGGCGCGGTGGCCGAGCTGGAGGAGGAGAACGCGCGGCTGCGACGCGAGAATGCGAGGCTGGCGCGGGAGCTGGCCCGCGCGCGGCGCCTCTGCGACGGCGTGCGCCAGCTCATGGCTCGGTACGACGACGACCAAGGCAGAGGCGGAGATGAGGATCCGGCGGACGGCGACGAGGGGCATGGCGGCAGTGGGGAAGGTCCCAGCGGCCCAGAAGTGAAGCCAATGCTGTTCGGCGTCCCAATCGGGGCCAAGCGGCTACGCGGTGCGCGTGGTGATGGAGACGATGTAGATGACGGCGAGGACAACGACGAGGAACAAGATGAAGACGACGAGAGGCAAACGGTGCGGAAGCAGGGGGTTAAAGCGGCCAGGAGGAACGAGGCGTCGGATCTGGACGTGCTGACGCTGTCCGTGCGGGCGGCCGCGGCGGCGAGGACGGGCGGAGGATCACGTGACCGCAAAAGCCCCATTAACGCCCACCCCGATAGGAGCCTCAGTCTAGGGCTGAAATGACTGACACTCGTGTAGAGTACTGTAGTATCGATTGTAGTATTGTATTGAGTGGTGCTGCACGGTTGAATTGAATCATCTAGAAATCAAAATTTAGCAACGGGGCATCTCCTGACTGTCAAGTAGAATGTTTAAATAATAATTACATATATAAATATAGTTTAGTTATAAAACTAAAAGCATCTCCAAC
GRMZM2G301485_T01 from maize genome v3
Amino Acid Sequence
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MALPAAGTPPFLTKTYAMVEDSATDDTISWNDTGTAFVVWRPAEFARDLLPKHFKHSNFSSFVRQLNTYGFKKVVGDRWE
FANDGFRRGEKHLLAGIQRRKGTGAVAAVPVPGIPAGIPLPLSSPPTSSGGEPAVSSSPPRGSTAGVSGAVAELEEENAR
LRRENARLARELARARRLCDGVRQLMARYDDDQGRGGDEDPADGDEGHGGSGEGPSGPEVKPMLFGVPIGAKRLRGARGD
GDDVDDGEDNDEEQDEDDERQTVRKQGVKAARRNEASDLDVLTLSVRAAAAARTGGGSRDRKSPINAHPDRSLSLGLK
Nucleotide Sequence
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CCATTTGGGCTCTGTCCAAGTGTAA...
CCATTTGGGCTCTGTCCAAGTGTAACTCAGCCCATCAATCCAAACGGGCACTCTCTAGAAACAACGCACGTGTCGGCTACCGCAAGGAAAGTCGGGAACCTTCTAGAACCCGCTGGATGCTTCTCTCACCTAGGTCCAACTTAATCTCATCCCCAAATCCACCTTTCTAGATGCGTCTTCCTCGCTCTGTCCTCTCCTCACACTTTCCTTTCCGCGGCCCCTCTGCTCACCGCACTCCGTTGCCTGATGGCGTTGCCGGCGGCGGGGACGCCGCCCTTCCTGACGAAAACTTACGCCATGGTGGAGGACTCGGCCACGGACGATACGATCTCGTGGAACGACACCGGCACGGCCTTCGTGGTGTGGCGCCCCGCCGAGTTCGCCCGTGACCTTCTTCCCAAGCACTTCAAGCACAGCAACTTCTCCTCGTTCGTCCGCCAGCTCAACACCTACGGATTCAAGAAGGTAGTCGGGGACAGATGGGAGTTTGCCAACGACGGCTTCCGGAGAGGCGAGAAGCACCTTCTCGCCGGAATACAGAGGCGGAAGGGGACCGGCGCCGTGGCGGCGGTACCGGTGCCGGGCATACCGGCGGGGATACCGTTACCGCTCTCGTCCCCGCCCACGAGCTCTGGCGGGGAGCCGGCGGTCTCCTCGTCGCCGCCGCGTGGCTCGACGGCTGGAGTTAGCGGCGCGGTGGCCGAGCTGGAGGAGGAGAACGCGCGGCTGCGACGCGAGAATGCGAGGCTGGCGCGGGAGCTGGCCCGCGCGCGGCGCCTCTGCGACGGCGTGCGCCAGCTCATGGCTCGGTACGACGACGACCAAGGCAGAGGCGGAGATGAGGATCCGGCGGACGGCGACGAGGGGCATGGCGGCAGTGGGGAAGGTCCCAGCGGCCCAGAAGTGAAGCCAATGCTGTTCGGCGTCCCAATCGGGGCCAAGCGGCTACGCGGTGCGCGTGGTGATGGAGACGATGTAGATGACGGCGAGGACAACGACGAGGAACAAGATGAAGACGACGAGAGGCAAACGGTGCGGAAGCAGGGGGTTAAAGCGGCCAGGAGGAACGAGGCGTCGGATCTGGACGTGCTGACGCTGTCCGTGCGGGCGGCCGCGGCGGCGAGGACGGGCGGAGGATCACGTGACCGCAAAAGCCCCATTAACGCCCACCCCGATAGGAGCCTCAGTCTAGGGCTGAAATGACTGACACTCGTGTAGAGTACTGTAGTATCGATTGTAGTATTGTATTGAGTGGTGCTGCACGGTTGAATTGAATCATCTAGAAATCAAAATTTAGCAA
Zm00001d026094_T001 from maize genome v4
Amino Acid Sequence
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MALPAAGTPPFLTKTYAMVEDSATDDTISWNDTGTAFVVWRPAEFARDLLPKHFKHSNFSSFVRQLNTYGFKKVVGDRWE
FANDGFRRGEKHLLAGIQRRKGTGAVAAVPVPGIPAGIPLPLSSPPTSSGGEPAVSSSPPRGSTAGVSGAVAELEEENAR
LRRENARLARELARARRLCDGVRQLMARYDDDQGRGGDEDPADGDEGHGGSGEGPSGPEVKPMLFGVPIGAKRLRGARGD
GDDVDDGEDNDEEQDEDDERQTVRKQGVKAARRNEASDLDVLTLSVRAAAAARTGGGSRDRKSPINAHPDRSLSLGLK
Nucleotide Sequence
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AGGTCCAACTTAATCTCATCCCCAA...
AGGTCCAACTTAATCTCATCCCCAAATCCACCTTTCTAGATGCGTCTTCCTCGCTCTGTCCTCTCCTCACACTTTCCTTTCCGCGGCCCCTCTGCTCACCGCACTCCGTTGCCTGATGGCGTTGCCGGCGGCGGGGACGCCGCCCTTCCTGACGAAAACTTACGCCATGGTGGAGGACTCGGCCACGGACGATACGATCTCGTGGAACGACACCGGCACGGCCTTCGTGGTGTGGCGCCCCGCCGAGTTCGCCCGTGACCTTCTTCCCAAGCACTTCAAGCACAGCAACTTCTCCTCGTTCGTCCGCCAGCTCAACACCTACGGATTCAAGAAGGTAGTCGGGGACAGATGGGAGTTTGCCAACGACGGCTTCCGGAGAGGCGAGAAGCACCTTCTCGCCGGAATACAGAGGCGGAAGGGGACCGGCGCCGTGGCGGCGGTACCGGTGCCGGGCATACCGGCGGGGATACCGTTACCGCTCTCGTCCCCGCCCACGAGCTCTGGCGGGGAGCCGGCGGTCTCCTCGTCGCCGCCGCGTGGCTCGACGGCTGGAGTTAGCGGCGCGGTGGCCGAGCTGGAGGAGGAGAACGCGCGGCTGCGACGCGAGAATGCGAGGCTGGCGCGGGAGCTGGCCCGCGCGCGGCGCCTCTGCGACGGCGTGCGCCAGCTCATGGCTCGGTACGACGACGACCAAGGCAGAGGCGGAGATGAGGATCCGGCGGACGGCGACGAGGGGCATGGCGGCAGTGGGGAAGGTCCCAGCGGCCCAGAAGTGAAGCCAATGCTGTTCGGCGTCCCAATCGGGGCCAAGCGGCTACGCGGTGCGCGTGGTGATGGAGACGATGTAGATGACGGCGAGGACAACGACGAGGAACAAGATGAAGACGACGAGAGGCAAACGGTGCGGAAGCAGGGGGTTAAAGCGGCCAGGAGGAACGAGGCGTCGGATCTGGACGTGCTGACGCTGTCCGTGCGGGCGGCCGCGGCGGCGAGGACGGGCGGAGGATCACGTGACCGCAAAAGCCCCATTAACGCCCACCCCGATAGGAGCCTCAGTCTAGGGCTGAAATGACTGACACTCGTGTAGAGTACTGTAGTATCGATTGTAGTATTGTATTGAGTGGTGCTGCACGGTTGAATTGAATCATCTAGAAATCAAAATTTAGCAACGGG
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